Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921020.1_cds_XP_016470057.1_62546
CDS Infomation

[gene=LOC107792362] [db_xref=GeneID:107792362] [protein=TBCC domain-containing protein 1-like] [protein_id=XP_016470057.1] [location=complement(join(76722..76765,76849..76960,77132..77224,77430..77633,81216..81356,81859..81963,86799..87179,90083..90223,91248..91745))] [gbkey=CDS]
Sequence

ATGGCGGAATCCGATGAAACACCGTCACCGGCGACGACACCATCCACCGCCCCAATATAC
ATTCACCCACGCAGGGAGCCATTTGAACACGGCCTATTACCGATCCCGAAGCTAATCTTC
ACCGACGGAACACAAACCCTAGGTCCAATTAAGGACAAGCTATTATCCTCCCTTTCGTCC
TCCGAGTCAAGTACTACGAACCAACGCGTTAACACGGAATCCATTGCTGAGTCCCTTCAG
ATCTCGCTCGAACACGCTCGCCTCGTCCTCGAAACCATTGCTTGTGTTCTTCACTCCGAT
TCGGACCCTCTCGTTACCGCTAAGCCCTCCGAGGTCGGCTCTATCGGTGTTAATGTGTTT
GATTTGGTTGTATTTTTGTACATTCAGAGTTACAAAAGGTTGCTTCCTAAAGGACATAAG
GATTCAGCTGCCGTAGCTGATGTTTGGCCTTCTACTTCGGCTTTCGACGGGTTCTTGTCC
GCATTGTCGCCGTTGCAGCTTGTACGTAGCAATAGTCGACGAAATATGCCATCACAATCT
GATGAAGAGGCTCATCAGTTATCCTATTTACAAAAGCACCTGGGAAACATTCTGTCTCTT
TTGTCAGAGGCAGTAGAAGGAGAGGGCGACGAAACACTGGTTCTGTCCGCAGAGAAATTT
GAGCATCTTGGTTTTCTATTCTATTTTGGTGAAAAGGGATCTGAGAGAATCCCATTGAGT
CAGAATGCCCCATTTTTTGCCAATTCAGATCCAGACATGCCAGCTGTTCCTGTTCCTGCA
GCTCAAGTACATGATTGGCTGCTACAAAATATAGCGTCTGCTCTGGAACGCATTACTGAG
AGGGCTTCTGCGAAGGAAAATGGACCAACCAGTGCCATCGACCAGGATGTGCCAATGGCT
GATGTCTCTGCAAGTTCAGTAAAGAGTTCATTGAGTCCTAGAGGCCCAAATTTCATTGAG
GGAATCTCGAAAACATCATATGTACGTCAGCCAAATGATCTTAAAGGCTCTTCTGTGAAG
GTTGTCAATTGCCATGAATCAGTCATTTACATTTTAGCACCTCTGAAATATGCTACAGTA
TACGGATGCTCTGATGCAACCATTTTCCTGGGAGCTGTTGGCAAGGCTGTAAGAGTTGAG
CACTGTGAACGTGTGCATGTGATAGCAGCGGCTAAACGTATCTGTATCATCAACTGTCGT
GAATGTGTATTTTTCCTGGGAGTAAATCAAACACCACTTGTTGTTGGTGATAACCATAAA
TTGCAGGTGGCTCCATACAATACTTTTTACTCCCAGCTGGAGGAGCACCTGAATGTAGTT
GGTATTGATCCAGCCATCAACAAATGGGATGAACCTGTGGCTCTTGGCGTTGTTGATCCA
CATGATTCGCTTTCACATCCTGCAGGTGTTTCTGATGTTCAGACTGAGTCCGCCAGTCGC
ATAGACCCCGATCAGTTCACTAACTTTTTGATTCCACACTGGTTTGAAGGTGAACAATCT
GGGTCAACAAAAAACAATCCATTCCCTTTACCTGATGCTTACATGGCATCGCAGCAGAGA
AGGCAAAAAAACTTGGAGGAGATTAAGCAGAGCTTGCGGGAAGCTGAGCTTGAAGAGAGC
CGGAAAAAGGAATTAACAACAGCTCTCCATCAGTGCTTTAAAGACTGGTTATATGCTTCA
GGAAATATACGGCAATTGTACTGTCTTCAAAATGATTAG

Peptide Sequence

PEP ID

XP_016470057.1
PEP Infomation

PREDICTED: TBCC domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MAESDETPSPATTPSTAPIYIHPRREPFEHGLLPIPKLIFTDGTQTLGPIKDKLLSSLSS
SESSTTNQRVNTESIAESLQISLEHARLVLETIACVLHSDSDPLVTAKPSEVGSIGVNVF
DLVVFLYIQSYKRLLPKGHKDSAAVADVWPSTSAFDGFLSALSPLQLVRSNSRRNMPSQS
DEEAHQLSYLQKHLGNILSLLSEAVEGEGDETLVLSAEKFEHLGFLFYFGEKGSERIPLS
QNAPFFANSDPDMPAVPVPAAQVHDWLLQNIASALERITERASAKENGPTSAIDQDVPMA
DVSASSVKSSLSPRGPNFIEGISKTSYVRQPNDLKGSSVKVVNCHESVIYILAPLKYATV
YGCSDATIFLGAVGKAVRVEHCERVHVIAAAKRICIINCRECVFFLGVNQTPLVVGDNHK
LQVAPYNTFYSQLEEHLNVVGIDPAINKWDEPVALGVVDPHDSLSHPAGVSDVQTESASR
IDPDQFTNFLIPHWFEGEQSGSTKNNPFPLPDAYMASQQRRQKNLEEIKQSLREAELEES
RKKELTTALHQCFKDWLYASGNIRQLYCLQND

Transcript Sequence

Gene sequence data has not been registered.